Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015836356.1_cds_XP_016506304.1_19542
CDS Infomation

[gene=LOC107824093] [db_xref=GeneID:107824093] [protein=IAA-amino acid hydrolase ILR1-like 6] [protein_id=XP_016506304.1] [location=complement(join(6363..6731,7965..8093,8579..8893,12313..12438,13126..13641))] [gbkey=CDS]
Sequence

ATGGATACCCTAGTGAAGTTATTTCCAATAACTTGTAAAAAAGCAATTTTTTTTGCCATA
TTTCTTGGTTTCATTTTAACTAATCCATTAAAGGGAGCAAAAACCTCTGCTTCCTCTTCC
TCTGATCAACATGATTTCACATACTTCAAATCCATTACTTTATTAAAAAATCCCAATAAT
ATGGTCCTTCAAAACCAAACAAGAACATCAAAACTCAAACTTTTTACCTCCTCGGACTGC
TCAATTTGGACAAAAGAATGCTCAAATGAAATTCTGAAAATTGCCCAGAAGAAAGAGCAT
GTGAAATGGATAAAATCAGTGAGGAGAAAAATACATGAATACCCTGAACTTGCTTTTGAA
GAATATGAAACTAGTGAACTGGTTCGTCAAGAACTTGAGAAAATGGAGATTCCTTATCAG
TTTCCGTTAGCTACTACCGGAATTCGAGCCATGATCGGCTCCGGCCAGCCGCCGTTTGTT
GCTCTCAGAGCTGATATGGATGCCCTTCCAATTCAGGAAGCTGTTGAATGGGAGCACAAG
AGCAAAATTGCGGGCAAAATGCACGCTTGTGGTCACGACGCTCATGTGGCTATGCTCATA
GGTGCAGCCAAGATTTTAAAGGCTCGTGAGAAGAACTTAAAGGGGACAGTGATTCTAATA
TTTCAGCCAGCAGAGGAAGCAGGGAATGGAGCAAAAAGGATGATAAAAAATGGAGCTTTA
GAAAATGTAGAGGCTATATTTGCTGTTCATGTTTCACATCAGCATCCAACTGGTGTAATT
GGTTCAAGACCTGGGCCTCTTCTTGCTGGATGTGGCTTTTTTAGAGCTGTCATTAGTGGT
AAGACAGGCCAAGCAAGCAATCCCCACCACTCTATTGACCCTGTACTTGCTGCTTCTGCT
GCTGTTATCAGCTTGCAAAGTATTGTTTCTCGCGAATCCAATCCCTTGGATTCTCAGGTG
GTGTCGGTGACATCGTTCAATGCCGGAGATAAGTTTGATGTGATACCAGAAGCAGTTACT
CTCAGTGGTACTTTCAGGGCTTTCTCCAGCACCAACTTTTATCAGCTTCTTAGAAGAATA
AGAGAGGTATTCACAGAACAAGCTAGTGTGTTCAGATGCAGTGCAACAGTGGAGTTTTTC
GAAGACAAGGACACAATCTATCCTCCGACAGTGAACGACGACAGAATGTACGAACATGTG
AAGAAGGTCGCCGGTGATTTGGTTGGTCCGACGAACTTTAAGGTAGTTCCACCGATGATG
GGAGCCGAGGACTTCTCCTTCTACTCTGAACTGATACCTGCAGCATTCTTCTATATAGGG
ATAAGGAATGAGACATTAGGATCATATCACACAGGACACTCTCCTCATTTCATGATTGAT
GAAGATGTATTGCCTATTGGTGCAGCAACTCATGCTGCAATTGCGGAAAGATACCTTTAT
GAGTATGGATCTTGA

Peptide Sequence

PEP ID

XP_016506304.1
PEP Infomation

PREDICTED: IAA-amino acid hydrolase ILR1-like 6 [Nicotiana tabacum]
Sequence

MDTLVKLFPITCKKAIFFAIFLGFILTNPLKGAKTSASSSSDQHDFTYFKSITLLKNPNN
MVLQNQTRTSKLKLFTSSDCSIWTKECSNEILKIAQKKEHVKWIKSVRRKIHEYPELAFE
EYETSELVRQELEKMEIPYQFPLATTGIRAMIGSGQPPFVALRADMDALPIQEAVEWEHK
SKIAGKMHACGHDAHVAMLIGAAKILKAREKNLKGTVILIFQPAEEAGNGAKRMIKNGAL
ENVEAIFAVHVSHQHPTGVIGSRPGPLLAGCGFFRAVISGKTGQASNPHHSIDPVLAASA
AVISLQSIVSRESNPLDSQVVSVTSFNAGDKFDVIPEAVTLSGTFRAFSSTNFYQLLRRI
REVFTEQASVFRCSATVEFFEDKDTIYPPTVNDDRMYEHVKKVAGDLVGPTNFKVVPPMM
GAEDFSFYSELIPAAFFYIGIRNETLGSYHTGHSPHFMIDEDVLPIGAATHAAIAERYLY
EYGS

Transcript Sequence

Gene sequence data has not been registered.